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Dr. J.A. Kaandorp

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Expertise Informatics
Expertise (NL) Informatica
Digital Author ID info:eu-repo/dai/nl/07266567X

Active as

Associate professor
Organisation Informatics Institute (UvA)
Chair (EN) Informatics
Chair (NL) Informatica
Phone +31-20-5257539
Email J. A. Kaandorp -at- uva. nl
URL http://carol.wins.uva.nl/~jaapk/

Publications

Simulating and quantifying the environmental influence on coral colony growth and form
A cell-based model of Nematostella vectensis gastrulation including bottle cell formation, invagination and zippering
Modeling Filamentous Cyanobacteria Reveals the Advantages of Long and Fast Trichomes for Optimizing Light Exposure
Genetic regulatory networks inference : modeling, parameters estimation & model validation
Euro ISRS symposium 2010: reefs in a changing environment: book of abstracts
All publications..

Enhanced publications

Doctoral Thesis: Mathematical modeling of metal ion homeostasis and signaling systems
Doctoral Thesis: Modelling, Simulation, and Inferring Regulatory Networks
Doctoral Thesis: Modelling, simulation, and inferring regulatory networks

Current research

(the most recent research is at the top)
Project leader Multi-objective optimization for modeling developmental gene regulatory networks
Project leader Multi-scale modelling of calcification in scleractinian corals
Project leader VEARD: A Visual Exploration environment for Analyzing gene Regulation in Developmental processes
Project leader A Visual Exploration environment for Analyzing gene Regulation in Developmental processes

Completed research projects

(the most recent research is at the top)
Project leader Modelling and inferring developmental regulatory networks
Project leader Simulation of developmental regulatory networks
Project leader Mathematical Modeling of Metal Ion Homeostasis and Signaling Systems

Classification

D16800 Computer simulation, virtual reality
D21100 Bioinformatics, biomathematics, biomechanics

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